Alexander V. Zhdanov

Publications

• Heterosubstituted Derivatives of PtPFPP for O Sensing and Cell Analysis: Structure-Activity Relationships
  Bioconjugate Chemistry. Nov, 2022  |   Pubmed ID: 36289566
• Ghrelin Rapidly Elevates Protein Synthesis in Vitro by Employing the RpS6K-eEF2K-eEF2 Signalling Axis
  Cellular and Molecular Life Sciences : CMLS. Jul, 2022  |   Pubmed ID: 35841486
• Mitochondrial Complex IV Defects Induce Metabolic and Signaling Perturbations That Expose Potential Vulnerabilities in HCT116 Cells
  FEBS Open Bio. May, 2022  |   Pubmed ID: 35302710
• Cell Energy Budget Platform for Multiparametric Assessment of Cell and Tissue Metabolism
  Methods in Molecular Biology (Clifton, N.J.). 2021  |   Pubmed ID: 34060051
• The Gut Microbiome Influences the Bioavailability of Olanzapine in Rats
  EBioMedicine. Apr, 2021  |   Pubmed ID: 33819741
• Mapping O Concentration in Ex-vivo Tissue Samples on a Fast PLIM Macro-imager
  Scientific Reports. Nov, 2020  |   Pubmed ID: 33149165
• Reduced Oxidative Phosphorylation and Increased Glycolysis in Human Glaucoma Lamina Cribrosa Cells
  Investigative Ophthalmology & Visual Science. Nov, 2020  |   Pubmed ID: 33137197
• Unusually Efficient CUG Initiation of an Overlapping Reading Frame in MRNA Yields Novel Protein POLGARF
  Proceedings of the National Academy of Sciences of the United States of America. Oct, 2020  |   Pubmed ID: 32958672
• Translation Initiation Downstream from Annotated Start Codons in Human MRNAs Coevolves with the Kozak Context
  Genome Research. Jul, 2020  |   Pubmed ID: 32669370
• Short-chain Fatty Acids and Microbiota Metabolites Attenuate Ghrelin Receptor Signaling
  FASEB Journal : Official Publication of the Federation of American Societies for Experimental Biology. Dec, 2019  |   Pubmed ID: 31545915
• Nanoparticle-based Fluoroionophore for Analysis of Potassium Ion Dynamics in 3D Tissue Models and
  Advanced Functional Materials. Feb, 2018  |   Pubmed ID: 30271316
• AMD1 MRNA Employs Ribosome Stalling As a Mechanism for Molecular Memory Formation
  Nature. Jan, 2018  |   Pubmed ID: 29310120
• Insulin-like Growth Factor 1 Signaling is Essential for Mitochondrial Biogenesis and Mitophagy in Cancer Cells
  The Journal of Biological Chemistry. Oct, 2017  |   Pubmed ID: 28821609
• Low Energy Costs of F1Fo ATP Synthase Reversal in Colon Carcinoma Cells Deficient in Mitochondrial Complex IV
  Free Radical Biology & Medicine. May, 2017  |   Pubmed ID: 28189850
• Cellular ROS Imaging with Hydro-Cy3 Dye is Strongly Influenced by Mitochondrial Membrane Potential
  Biochimica Et Biophysica Acta. General Subjects. Feb, 2017  |   Pubmed ID: 27818165
• Quantitative Analysis of Mucosal Oxygenation Using Ex Vivo Imaging of Healthy and Inflamed Mammalian Colon Tissue
  Cellular and Molecular Life Sciences : CMLS. Jan, 2017  |   Pubmed ID: 27510419
• Phosphorescence Based O Sensors - Essential Tools for Monitoring Cell and Tissue Oxygenation and Its Impact on Metabolism
  Free Radical Biology & Medicine. Dec, 2016  |   Pubmed ID: 27789291
• Imaging of Oxygen Gradients in Giant Umbrella Cells: an Ex Vivo PLIM Study
  American Journal of Physiology. Cell Physiology. Oct, 2015  |   Pubmed ID: 26246428
• A Novel Effect of DMOG on Cell Metabolism: Direct Inhibition of Mitochondrial Function Precedes HIF Target Gene Expression
  Biochimica Et Biophysica Acta. Oct, 2015  |   Pubmed ID: 26143176
• Prenatal Stress-induced Alterations in Major Physiological Systems Correlate with Gut Microbiota Composition in Adulthood
  Psychoneuroendocrinology. Oct, 2015  |   Pubmed ID: 26135201
• Oxygen and Glucose Deprivation Induces Widespread Alterations in MRNA Translation Within 20 Minutes
  Genome Biology. May, 2015  |   Pubmed ID: 25943107
• Cell Energy Budget Platform for Assessment of Cell Metabolism
  Methods in Molecular Biology (Clifton, N.J.). 2015  |   Pubmed ID: 25634285
• Differential Contribution of Key Metabolic Substrates and Cellular Oxygen in HIF Signalling
  Experimental Cell Research. Jan, 2015  |   Pubmed ID: 25447307
• Imaging Oxygen in Neural Cell and Tissue Models by Means of Anionic Cell-permeable Phosphorescent Nanoparticles
  Cellular and Molecular Life Sciences : CMLS. Jan, 2015  |   Pubmed ID: 25006059
• Small Molecule Phosphorescent Probes for O Imaging in 3D Tissue Models
  Biomaterials Science. Jun, 2014  |   Pubmed ID: 32481818
• Kinetic Analysis of Local Oxygenation and Respiratory Responses of Mammalian Cells Using Intracellular Oxygen-sensitive Probes and Time-resolved Fluorometry
  Methods in Enzymology. 2014  |   Pubmed ID: 24862267
• The Mouse Cyclophosphamide Model of Bladder Pain Syndrome: Tissue Characterization, Immune Profiling, and Relationship to Metabotropic Glutamate Receptors
  Physiological Reports. 2014  |   Pubmed ID: 24760514
• Availability of the Key Metabolic Substrates Dictates the Respiratory Response of Cancer Cells to the Mitochondrial Uncoupling
  Biochimica Et Biophysica Acta. Jan, 2014  |   Pubmed ID: 23891695
• Imaging of Neurosphere Oxygenation with Phosphorescent Probes
  Biomaterials. Dec, 2013  |   Pubmed ID: 24016849
• Chronic Hypoxia Leads to a Glycolytic Phenotype and Suppressed HIF-2 Signaling in PC12 Cells
  Biochimica Et Biophysica Acta. Jun, 2013  |   Pubmed ID: 23462283
• Bafilomycin A1 Activates HIF-dependent Signalling in Human Colon Cancer Cells Via Mitochondrial Uncoupling
  Bioscience Reports. Dec, 2012  |   Pubmed ID: 22943412
• Assessment of Cellular Oxygen Gradients with a Panel of Phosphorescent Oxygen-sensitive Probes
  Analytical Chemistry. Mar, 2012  |   Pubmed ID: 22380020
• Intracellular O2 Sensing Probe Based on Cell-penetrating Phosphorescent Nanoparticles
  ACS Nano. Jul, 2011  |   Pubmed ID: 21671589
• Bafilomycin A1 Activates Respiration of Neuronal Cells Via Uncoupling Associated with Flickering Depolarization of Mitochondria
  Cellular and Molecular Life Sciences : CMLS. Mar, 2011  |   Pubmed ID: 20820851
• Bactenecin 7 Peptide Fragment As a Tool for Intracellular Delivery of a Phosphorescent Oxygen Sensor
  The FEBS Journal. Nov, 2010  |   Pubmed ID: 20883447
• Dysregulation of Hypoxia Pathways in Fumarate Hydratase-deficient Cells is Independent of Defective Mitochondrial Metabolism
  Human Molecular Genetics. Oct, 2010  |   Pubmed ID: 20660115
• Monitoring of Cell Oxygenation and Responses to Metabolic Stimulation by Intracellular Oxygen Sensing Technique
  Integrative Biology : Quantitative Biosciences from Nano to Macro. Sep, 2010  |   Pubmed ID: 20657921
• Extracellular Calcium Depletion Transiently Elevates Oxygen Consumption in Neurosecretory PC12 Cells Through Activation of Mitochondrial Na+/Ca2+ Exchange
  Biochimica Et Biophysica Acta. Sep, 2010  |   Pubmed ID: 20550942
• Imaging of Cellular Oxygen and Analysis of Metabolic Responses of Mammalian Cells
  Methods in Molecular Biology (Clifton, N.J.). 2010  |   Pubmed ID: 19957136
• Intracellular Oxygen-sensitive Phosphorescent Probes Based on Cell-penetrating Peptides
  Analytical Biochemistry. Mar, 2010  |   Pubmed ID: 19931212
• In Vitro Analysis of Cell Metabolism Using a Long-decay PH-sensitive Lanthanide Probe and Extracellular Acidification Assay
  Analytical Biochemistry. Jul, 2009  |   Pubmed ID: 19379702
• PGC-1alpha is Coupled to HIF-1alpha-dependent Gene Expression by Increasing Mitochondrial Oxygen Consumption in Skeletal Muscle Cells
  Proceedings of the National Academy of Sciences of the United States of America. Feb, 2009  |   Pubmed ID: 19179292
• Dynamics of Intracellular Oxygen in PC12 Cells Upon Stimulation of Neurotransmission
  The Journal of Biological Chemistry. Feb, 2008  |   Pubmed ID: 18086678
• Rab11-FIP3 is Critical for the Structural Integrity of the Endosomal Recycling Compartment
  Traffic (Copenhagen, Denmark). Apr, 2007  |   Pubmed ID: 17394487