Kazuharu Arakawa Institute for Advanced Biosciences Keio University Biography Publications Institution JoVE Articles Kazuharu Arakawa has not added a biography. If you are Kazuharu Arakawa and would like to personalize this page please email our Author Liaison for assistance. Publications An Integrative Description of Macrobiotus Shonaicus Sp. Nov. (Tardigrada: Macrobiotidae) from Japan with Notes on Its Phylogenetic Position Within the Hufelandi Group PloS One. 2018 | Pubmed ID: 29489835 Collaborative Environmental DNA Sampling from Petal Surfaces of Flowering Cherry Cerasus × yedoensis 'Somei-yoshino' Across the Japanese Archipelago Journal of Plant Research. Jul, 2018 | Pubmed ID: 29460198 ERP Arrangement: a Strategy for Assembled Genomic Contig Rearrangement Based on Replication Profiling in Bacteria BMC Genomics. Oct, 2017 | Pubmed ID: 29029602 Analysis of Repetitive Amino Acid Motifs Reveals the Essential Features of Spider Dragline Silk Proteins PloS One. 2017 | Pubmed ID: 28832627 Comparative Genomics of the Tardigrades Hypsibius Dujardini and Ramazzottius Varieornatus PLoS Biology. Jul, 2017 | Pubmed ID: 28749982 Glucan Synthase-like 2 is Indispensable for Paramylon Synthesis in Euglena gracilis FEBS Letters. 05, 2017 | Pubmed ID: 28423179 Rearing and Observation of Immature Stages of the Hoverfly (Diptera, Syrphidae) Biodiversity Data Journal. 2016 | Pubmed ID: 28174503 Extremotolerant Tardigrade Genome and Improved Radiotolerance of Human Cultured Cells by Tardigrade-unique Protein Nature Communications. Sep, 2016 | Pubmed ID: 27649274 Genome Sequencing of a Single Tardigrade Hypsibius Dujardini Individual Scientific Data. 08, 2016 | Pubmed ID: 27529330 No Evidence for Extensive Horizontal Gene Transfer from the Draft Genome of a Tardigrade Proceedings of the National Academy of Sciences of the United States of America. May, 2016 | Pubmed ID: 27173901 De Novo Assembly and Comparative Transcriptome Analysis of Euglena Gracilis in Response to Anaerobic Conditions BMC Genomics. Mar, 2016 | Pubmed ID: 26939900 Evaluation of the Impact of RNA Preservation Methods of Spiders for De Novo Transcriptome Assembly Molecular Ecology Resources. May, 2016 | Pubmed ID: 26561354 Novel Mitochondria-targeted Heat-soluble Proteins Identified in the Anhydrobiotic Tardigrade Improve Osmotic Tolerance of Human Cells PloS One. 2015 | Pubmed ID: 25675104 G-Links: a Gene-centric Link Acquisition Service F1000Research. 2014 | Pubmed ID: 26673001 Performance Comparison of Second- and Third-generation Sequencers Using a Bacterial Genome with Two Chromosomes BMC Genomics. Aug, 2014 | Pubmed ID: 25142801 Undesigned Selection for Replication Termination of Bacterial Chromosomes Journal of Molecular Biology. Aug, 2014 | Pubmed ID: 24946150 BioHackathon Series in 2011 and 2012: Penetration of Ontology and Linked Data in Life Science Domains Journal of Biomedical Semantics. Feb, 2014 | Pubmed ID: 24495517 GEMBASSY: an EMBOSS Associated Software Package for Comprehensive Genome Analyses Source Code for Biology and Medicine. Aug, 2013 | Pubmed ID: 23987304 Analysis of DNA Repair and Protection in the Tardigrade Ramazzottius Varieornatus and Hypsibius Dujardini After Exposure to UVC Radiation PloS One. 2013 | Pubmed ID: 23762256 Quantitative Assay for TALEN Activity at Endogenous Genomic Loci Biology Open. Apr, 2013 | Pubmed ID: 23616919 Merging Multiple Omics Datasets in Silico: Statistical Analyses and Data Interpretation Methods in Molecular Biology (Clifton, N.J.). 2013 | Pubmed ID: 23417818 Measures of Compositional Strand Bias Related to Replication Machinery and Its Applications Current Genomics. Mar, 2012 | Pubmed ID: 22942671 Two Novel Heat-soluble Protein Families Abundantly Expressed in an Anhydrobiotic Tardigrade PloS One. 2012 | Pubmed ID: 22937162 Validation of Bacterial Replication Termination Models Using Simulation of Genomic Mutations PloS One. 2012 | Pubmed ID: 22509315 Metabolic Flux Analysis and Visualization Journal of Proteome Research. Aug, 2011 | Pubmed ID: 21815690 KBWS: an EMBOSS Associated Package for Accessing Bioinformatics Web Services Source Code for Biology and Medicine. Apr, 2011 | Pubmed ID: 21529350 Comprehensive Prediction of Chromosome Dimer Resolution Sites in Bacterial Genomes BMC Genomics. Jan, 2011 | Pubmed ID: 21223577 G-language Genome Analysis Environment with REST and SOAP Web Service Interfaces Nucleic Acids Research. Jul, 2010 | Pubmed ID: 20439313 Quantitative Analysis of Replication-related Mutation and Selection Pressures in Bacterial Chromosomes and Plasmids Using Generalised GC Skew Index BMC Genomics. Dec, 2009 | Pubmed ID: 20042086 Pathway Projector: Web-based Zoomable Pathway Browser Using KEGG Atlas and Google Maps API PloS One. Nov, 2009 | Pubmed ID: 19907644 A Web Server for Interactive and Zoomable Chaos Game Representation Images Source Code for Biology and Medicine. Sep, 2009 | Pubmed ID: 19761591 Genome Projector: Zoomable Genome Map with Multiple Views BMC Bioinformatics. Jan, 2009 | Pubmed ID: 19166610 Comparative Study of Circadian Oscillatory Network Models of Drosophila Artificial Life. 2008 | Pubmed ID: 18171129 The GC Skew Index: a Measure of Genomic Compositional Asymmetry and the Degree of Replicational Selection Evolutionary Bioinformatics Online. Sep, 2007 | Pubmed ID: 19461976 Selection Effects on the Positioning of Genes and Gene Structures from the Interplay of Replication and Transcription in Bacterial Genomes Evolutionary Bioinformatics Online. Oct, 2007 | Pubmed ID: 19461975 Restauro-G: a Rapid Genome Re-annotation System for Comparative Genomics Genomics, Proteomics & Bioinformatics. Feb, 2007 | Pubmed ID: 17572364 Multiple High-throughput Analyses Monitor the Response of E. Coli to Perturbations Science (New York, N.Y.). Apr, 2007 | Pubmed ID: 17379776 In Silico Screening of Archaeal TRNA-encoding Genes Having Multiple Introns with Bulge-helix-bulge Splicing Motifs RNA (New York, N.Y.). May, 2007 | Pubmed ID: 17369313 Validating the Significance of Genomic Properties of Chi Sites from the Distribution of All Octamers in Escherichia Coli Gene. May, 2007 | Pubmed ID: 17270364 Noise-reduction Filtering for Accurate Detection of Replication Termini in Bacterial Genomes FEBS Letters. Jan, 2007 | Pubmed ID: 17188685 MEGU: Pathway Mapping Web-service Based on KEGG and SVG In Silico Biology. 2006 | Pubmed ID: 17518769 On the Interplay of Gene Positioning and the Role of Rho-independent Terminators in Escherichia Coli FEBS Letters. Dec, 2006 | Pubmed ID: 17156778 GPAC: Benchmarking the Sensitivity of Genome Informatics Analysis to Genome Annotation Completeness In Silico Biology. 2006 | Pubmed ID: 16789913 GEM System: Automatic Prototyping of Cell-wide Metabolic Pathway Models from Genomes BMC Bioinformatics. Mar, 2006 | Pubmed ID: 16553966 A Comprehensive Software Suite for the Analysis of CDNAs Genomics, Proteomics & Bioinformatics. Aug, 2005 | Pubmed ID: 16487083 KEGG-based Pathway Visualization Tool for Complex Omics Data In Silico Biology. 2005 | Pubmed ID: 16268787 एक एकल Tardigrade नमूना से Ultralow इनपुट जीनोम अनुक्रमण पुस्तकालय तैयारी Yuki Yoshida1,2, Sayuri Konno1,3, Ryousuke Nishino1,3, Yumi Murai1,3, Masaru Tomita1,2,3, Kazuharu Arakawa1,2,3 1Institute for Advanced Biosciences, Keio University, 2Systems Biology Program, Graduate School of Media and Governance, Keio University, 3Faculty of Environment and Information Studies, Keio University JoVE 57615 Genetics
एक एकल Tardigrade नमूना से Ultralow इनपुट जीनोम अनुक्रमण पुस्तकालय तैयारी Yuki Yoshida1,2, Sayuri Konno1,3, Ryousuke Nishino1,3, Yumi Murai1,3, Masaru Tomita1,2,3, Kazuharu Arakawa1,2,3 1Institute for Advanced Biosciences, Keio University, 2Systems Biology Program, Graduate School of Media and Governance, Keio University, 3Faculty of Environment and Information Studies, Keio University JoVE 57615 Genetics
