Xuerui Yang MOE Key Laboratory of Bioinformatics, Center for Synthetic and Systems Biology, School of Life Sciences Tsinghua University Biography Publications Institution JoVE Articles Xuerui Yang has not added a biography. If you are Xuerui Yang and would like to personalize this page please email our Author Liaison for assistance. Publications IGSF11 is Required for Pericentric Heterochromatin Dissociation During Meiotic Diplotene PLoS Genetics. 09, 2021 | Pubmed ID: 34491997 Identification of the Cross-strand Chimeric RNAs Generated by Fusions of Bi-directional Transcripts Nature Communications. 07, 2021 | Pubmed ID: 34330918 Chimeric Phi29 DNA Polymerase with Helix-hairpin-helix Motifs Shows Enhanced Salt Tolerance and Replication Performance Microbial Biotechnology. 07, 2021 | Pubmed ID: 34009743 Mutual Dependency Between LncRNA LETN and Protein NPM1 in Controlling the Nucleolar Structure and Functions Sustaining Cell Proliferation Cell Research. 06, 2021 | Pubmed ID: 33432115 COPII Mitigates ER Stress by Promoting Formation of ER Whorls Cell Research. 02, 2021 | Pubmed ID: 32989223 A Simple Blocking PCR-Based Method for the Synthesis of High-Copy DsDNA Tandem Repeats Small (Weinheim an Der Bergstrasse, Germany). 10, 2020 | Pubmed ID: 33006262 Lateral Transfer of MRNA and Protein by Migrasomes Modifies the Recipient Cells Cell Research. Sep, 2020 | Pubmed ID: 32994478 RiboMiner: a Toolset for Mining Multi-dimensional Features of the Translatome with Ribosome Profiling Data BMC Bioinformatics. Aug, 2020 | Pubmed ID: 32738892 Expression and Functional Study of VpV262 Pol, a Moderately Halophilic DNA Polymerase from the Vibrio Parahaemolyticus Phage VpV262 Enzyme and Microbial Technology. Sep, 2020 | Pubmed ID: 32732037 EIF3 Associates with 80S Ribosomes to Promote Translation Elongation, Mitochondrial Homeostasis, and Muscle Health Molecular Cell. 08, 2020 | Pubmed ID: 32589965 Ependyma-expressed CCN1 Restricts the Size of the Neural Stem Cell Pool in the Adult Ventricular-subventricular Zone The EMBO Journal. 03, 2020 | Pubmed ID: 32009252 Single-cell Transcriptome Analysis Reveals Differential Nutrient Absorption Functions in Human Intestine The Journal of Experimental Medicine. 02, 2020 | Pubmed ID: 31753849 IDH1 Fine-tunes Cap-dependent Translation Initiation Journal of Molecular Cell Biology. Oct, 2019 | Pubmed ID: 31408165 Survey of the Translation Shifts in Hepatocellular Carcinoma with Ribosome Profiling Theranostics. 2019 | Pubmed ID: 31281537 ZEB1 Represses Neural Differentiation and Cooperates with CTBP2 to Dynamically Regulate Cell Migration During Neocortex Development Cell Reports. 05, 2019 | Pubmed ID: 31116980 Nutrient Sensing by the Intestinal Epithelium Orchestrates Mucosal Antimicrobial Defense Via Translational Control of Hes1 Cell Host & Microbe. 05, 2019 | Pubmed ID: 31053533 Dependency of the Cancer-Specific Transcriptional Regulation Circuitry on the Promoter DNA Methylome Cell Reports. 03, 2019 | Pubmed ID: 30893615 Cideb Controls Sterol-regulated ER Export of SREBP/SCAP by Promoting Cargo Loading at ER Exit Sites The EMBO Journal. 04, 2019 | Pubmed ID: 30858281 Function of HNRNPC in Breast Cancer Cells by Controlling the DsRNA-induced Interferon Response The EMBO Journal. 12, 2018 | Pubmed ID: 30158112 Insights from Multidimensional Analyses of the Pan-cancer DNA Methylome Heterogeneity and the Uncanonical CpG-gene Associations International Journal of Cancer. 12, 2018 | Pubmed ID: 30121964 Oncogenic Properties of NEAT1 in Prostate Cancer Cells Depend on the CDC5L-AGRN Transcriptional Regulation Circuit Cancer Research. 08, 2018 | Pubmed ID: 29871935 The Number of Titrated MicroRNA Species Dictates CeRNA Regulation Nucleic Acids Research. 05, 2018 | Pubmed ID: 29684207 De Novo Annotation and Characterization of the Translatome with Ribosome Profiling Data Nucleic Acids Research. 06, 2018 | Pubmed ID: 29538776 Ribosome Profiling Reveals Genome-wide Cellular Translational Regulation Upon Heat Stress in Escherichia Coli Genomics, Proteomics & Bioinformatics. 10, 2017 | Pubmed ID: 29031842 Mettl3-/Mettl14-mediated MRNA N-methyladenosine Modulates Murine Spermatogenesis Cell Research. Oct, 2017 | Pubmed ID: 28914256 The R-loop is a Common Chromatin Feature of the Arabidopsis Genome Nature Plants. Sep, 2017 | Pubmed ID: 28848233 Germinal-center Development of Memory B Cells Driven by IL-9 from Follicular Helper T Cells Nature Immunology. Aug, 2017 | Pubmed ID: 28650481 High-throughput Validation of CeRNA Regulatory Networks BMC Genomics. 05, 2017 | Pubmed ID: 28558729 Precision Medicine: What Challenges Are We Facing? Genomics, Proteomics & Bioinformatics. 10, 2016 | Pubmed ID: 27744061 CryoEM Structure of Yeast Cytoplasmic Exosome Complex Cell Research. 07, 2016 | Pubmed ID: 27174052 Genome-wide Assessment of Differential Translations with Ribosome Profiling Data Nature Communications. Apr, 2016 | Pubmed ID: 27041671 Cupid: Simultaneous Reconstruction of MicroRNA-target and CeRNA Networks Genome Research. Feb, 2015 | Pubmed ID: 25378249 Double Stranded RNA-dependent Protein Kinase Promotes the Tumorigenic Phenotype in HepG2 Hepatocellular Carcinoma Cells by Activating STAT3 Oncology Letters. Dec, 2014 | Pubmed ID: 25360179 De novo Identification of Actively Translated Open Reading Frames with Ribosome Profiling Data Yanan Zhu*1, Fajin Li*2,3, Xuerui Yang2,3, Zhengtao Xiao1 1School of Basic Medical Sciences, Xi’an Jiaotong University Health Science Center, 2MOE Key Laboratory of Bioinformatics, Center for Synthetic and Systems Biology, School of Life Sciences, Tsinghua University, 3Joint Graduate Program of Peking-Tsinghua-National Institute of Biological Science JoVE 63366 Biology
De novo Identification of Actively Translated Open Reading Frames with Ribosome Profiling Data Yanan Zhu*1, Fajin Li*2,3, Xuerui Yang2,3, Zhengtao Xiao1 1School of Basic Medical Sciences, Xi’an Jiaotong University Health Science Center, 2MOE Key Laboratory of Bioinformatics, Center for Synthetic and Systems Biology, School of Life Sciences, Tsinghua University, 3Joint Graduate Program of Peking-Tsinghua-National Institute of Biological Science JoVE 63366 Biology
