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Biology
BiFC-FRET-FLIM Tahlilinde MADS Kutusu Transkripsiyon Faktörünün İki Monomeri ile Kalsiyum Sensör ...
BiFC-FRET-FLIM Tahlilinde MADS Kutusu Transkripsiyon Faktörünün İki Monomeri ile Kalsiyum Sensör ...
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Determination of Tripartite Interaction between Two Monomers of a MADS-box Transcription Factor and a Calcium Sensor Protein by BiFC-FRET-FLIM Assay

BiFC-FRET-FLIM Tahlilinde MADS Kutusu Transkripsiyon Faktörünün İki Monomeri ile Kalsiyum Sensör Proteini Arasındaki Üçlü Etkileşimin Belirlenmesi

Full Text
4,265 Views
14:34 min
December 25, 2021

DOI: 10.3791/62791-v

Neelima Boora*1, Vibha Verma*1, Ridhi Khurana1, Gautam Gawande1, Sanchi Bhimrajka1, Komal Chaprana1, Meenu Kapoor2, Sanjay Kapoor1

1Interdisciplinary Centre for Plant Genomics, Department of Plant Molecular Biology,University of Delhi South Campus, 2University School of Biotechnology,Guru Gobind Singh Indraprastha University

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Please note that some of the translations on this page are AI generated. Click here for the English version.

Overview

This study presents a novel method to visualize ternary complex formation between three proteins using bimolecular fluorescence complementation (BiFC) combined with fluorescence resonance energy transfer (FRET) and fluorescence lifetime imaging microscopy (FLIM). The approach allows for the observation of protein-protein interactions within live cells, enhancing our understanding of complex biological processes.

Key Study Components

Research Area

  • Protein-protein interactions
  • Fluorescent imaging technologies
  • Cell biology

Background

  • Understanding protein interactions is crucial for studying various biological functions.
  • This method builds on previous work utilizing BiFC for examining protein complexes.
  • The addition of FLIM provides a more detailed analysis of interactions.

Methods Used

  • BiFC-FRET-FLIM assay for visualizing protein interactions
  • Nicotiana benthamiana as the biological model system
  • Fluorescence lifetime measurements to assess interactions

Main Results

  • Successful demonstration of tripartite interactions between selected proteins.
  • Visualization of reconstituted YFP and its application in FRET analysis.
  • Quantification of interaction through changes in fluorescence lifetime.

Conclusions

  • The study effectively illustrates the use of BiFC-FRET-FLIM for examining complex protein interactions.
  • This method is significant for advancing research in molecular biology and protein signaling pathways.

Frequently Asked Questions

What is the significance of using BiFC with FRET-FLIM?
This combination allows researchers to visualize complex protein interactions and quantify them in vivo, improving our understanding of cell signaling.
Which organism was used in this study?
The study utilized Nicotiana benthamiana, a common model in plant molecular biology.
What are the critical steps in carrying out the method?
Key steps include cloning genes of interest, transforming agrobacteria, and performing agroinfiltration into plant tissues.
How does the method validate the tripartite interactions?
The method validates interactions by measuring the fluorescence lifetime changes of the donor molecule in the presence of acceptors.
What potential applications does this method have?
This method can be applied to study various protein interactions, signaling pathways, and cellular processes in live cells.
How long does it take to prepare plants for the analysis?
Plant preparation takes several weeks, including germination and growth stages before agroinfiltration can occur.
Is this method applicable to organisms other than plants?
While this study focuses on plants, similar techniques can be adapted for use in other model organisms.

Burada, BiFC tabanlı FRET-FLIM test tarafından floresan etiketli proteinler kullanarak üç protein ortağı arasındaki üçlü kompleks oluşumunu görselleştirmek için bir yöntem sunuyoruz. Bu yöntem, protein-proteinetkileşim komplekslerini vivo olarak incelemek için değerlidir.

Protein-protein etkileşimlerinin incelenmesi, birçok biyolojik işlemin düzenlenmesinin anlaşılmasını sağlar. Burada Y John ayakkabı ve co tarafından baş harfle açıklanan bir prosedürü gösteriyoruz. 2007'de, yazarların üç protein molekülü arasındaki üçlü etkileşimi doğrulamak için FRET ile birlikte BiFC'yi kullandıkları işçiler.

Bununla birlikte, FRET ölçümlerini doğrulamak için floresan ömür ölçümlerini bu prosedüre dahil ettik. Üçlü etkileşimi göstermek için homodimerize olduğu bilinen bir protein seçtik. Ayrıca, bu protokolde C proteini olarak adlandırılan bir kalsiyum protein sensörü ile etkileşime girmek için şirket içinde de doğrulanmıştır.

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