Daeyoup Lee

Publications

• Octopus-toolkit: a Workflow to Automate Mining of Public Epigenomic and Transcriptomic Next-generation Sequencing Data
  Nucleic Acids Research. Feb, 2018  |   Pubmed ID: 29420797
• Dot1 Regulates Nucleosome Dynamics by Its Inherent Histone Chaperone Activity in Yeast
  Nature Communications. 01, 2018  |   Pubmed ID: 29339748
• The 19S Proteasome Regulates Subtelomere Silencing and Facultative Heterochromatin Formation in Fission Yeast
  Current Genetics. Jun, 2018  |   Pubmed ID: 29214404
• It's Fun to Transcribe with Fun30: A Model for Nucleosome Dynamics During RNA Polymerase II-mediated Elongation
  Transcription. 2018  |   Pubmed ID: 28925811
• The Ino80 Complex Mediates Epigenetic Centromere Propagation Via Active Removal of Histone H3
  Nature Communications. 09, 2017  |   Pubmed ID: 28904333
• The 19S Proteasome is Directly Involved in the Regulation of Heterochromatin Spreading in Fission Yeast
  The Journal of Biological Chemistry. 10, 2017  |   Pubmed ID: 28784663
• Chromatin Remodeller Fun30 Induces Nucleosome Disassembly to Facilitate RNA Polymerase II Elongation
  Nature Communications. 02, 2017  |   Pubmed ID: 28218250
• Structural Insight into the Critical Role of the N-Terminal Region in the Catalytic Activity of Dual-Specificity Phosphatase 26
  PloS One. 2016  |   Pubmed ID: 27583453
• Both H4K20 Mono-methylation and H3K56 Acetylation Mark Transcription-dependent Histone Turnover in Fission Yeast
  Biochemical and Biophysical Research Communications. 08, 2016  |   Pubmed ID: 27268234
• Biogenesis and Regulation of the Let-7 MiRNAs and Their Functional Implications
  Protein & Cell. Feb, 2016  |   Pubmed ID: 26399619
• A Basal-like Breast Cancer-specific Role for SRF-IL6 in YAP-induced Cancer Stemness
  Nature Communications. Dec, 2015  |   Pubmed ID: 26671411
• Essential Function of Aco2, a Fusion Protein of Aconitase and Mitochondrial Ribosomal Protein BL21, in Mitochondrial Translation in Fission Yeast
  FEBS Letters. Mar, 2015  |   Pubmed ID: 25724335
• SET7/9 Methylation of the Pluripotency Factor LIN28A is a Nucleolar Localization Mechanism That Blocks Let-7 Biogenesis in Human ESCs
  Cell Stem Cell. Dec, 2014  |   Pubmed ID: 25479749
• A Histone Methyltransferase Inhibits Seed Germination by Increasing PIF1 mRNA Expression in Imbibed Seeds
  The Plant Journal : for Cell and Molecular Biology. Apr, 2014  |   Pubmed ID: 24635727
• Separation of a Functional Deubiquitylating Module from the SAGA Complex by the Proteasome Regulatory Particle
  Nature Communications. 2013  |   Pubmed ID: 24136112
• Gender-Specific Metabolomic Profiling of Obesity in Leptin-Deficient Ob/ob Mice by (1)H NMR Spectroscopy
  PloS One. 2013  |   Pubmed ID: 24098417
• High-resolution Crystal Structure of the Catalytic Domain of Human Dual-specificity Phosphatase 26
  Acta Crystallographica. Section D, Biological Crystallography. Jun, 2013  |   Pubmed ID: 23695260
• A Facile Strategy for Selective Incorporation of Phosphoserine into Histones
  Angewandte Chemie (International Ed. in English). May, 2013  |   Pubmed ID: 23533151
• Human Histone H3K79 Methyltransferase DOT1L Protein [corrected] Binds Actively Transcribing RNA Polymerase II to Regulate Gene Expression
  The Journal of Biological Chemistry. Nov, 2012  |   Pubmed ID: 23012353
• Hrp3 Controls Nucleosome Positioning to Suppress Non-coding Transcription in Eu- and Heterochromatin
  The EMBO Journal. Nov, 2012  |   Pubmed ID: 22990236
• H2B Monoubiquitylation is a 5'-enriched Active Transcription Mark and Correlates with Exon-intron Structure in Human Cells
  Genome Research. Jun, 2012  |   Pubmed ID: 22421545
• Genome-wide Analyses Reveal the Extent of Opportunistic STAT5 Binding That Does Not Yield Transcriptional Activation of Neighboring Genes
  Nucleic Acids Research. May, 2012  |   Pubmed ID: 22319210
• Decoding the Genome with an Integrative Analysis Tool: Combinatorial CRM Decoder
  Nucleic Acids Research. Sep, 2011  |   Pubmed ID: 21724599
• A Lysine-rich Region in Dot1p is Crucial for Direct Interaction with H2B Ubiquitylation and High Level Methylation of H3K79
  Biochemical and Biophysical Research Communications. Sep, 2010  |   Pubmed ID: 20678485
• Identification of the DNA Sequence Interacting with Kaposi's Sarcoma-associated Herpesvirus Viral Interferon Regulatory Factor 1
  Journal of Virology. Nov, 2007  |   Pubmed ID: 17855527
• BRCA1 Associates with Human Papillomavirus Type 18 E2 and Stimulates E2-dependent Transcription
  Biochemical and Biophysical Research Communications. Jun, 2003  |   Pubmed ID: 12767931
• Kaposi's Sarcoma-associated Herpesvirus K8 Protein Interacts with HSNF5
  The Journal of General Virology. Mar, 2003  |   Pubmed ID: 12604819
• Latency-associated Nuclear Antigen of Kaposi's Sarcoma-associated Herpesvirus Functionally Interacts with Heterochromatin Protein 1
  The Journal of Biological Chemistry. Feb, 2003  |   Pubmed ID: 12486118
• The Viral Oncogene Human Papillomavirus E7 Deregulates Transcriptional Silencing by Brm-related Gene 1 Via Molecular Interactions
  The Journal of Biological Chemistry. Dec, 2002  |   Pubmed ID: 12372840
• Functional Dissection of Latency-associated Nuclear Antigen 1 of Kaposi's Sarcoma-associated Herpesvirus Involved in Latent DNA Replication and Transcription of Terminal Repeats of the Viral Genome
  Journal of Virology. Oct, 2002  |   Pubmed ID: 12239308
• Functional Interaction Between Human Papillomavirus Type 18 E2 and Poly(ADP-ribose) Polymerase 1
  Oncogene. Aug, 2002  |   Pubmed ID: 12185587
• Viral Interferon Regulatory Factor 1 of Kaposi's Sarcoma-associated Herpesvirus Interacts with a Cell Death Regulator, GRIM19, and Inhibits Interferon/retinoic Acid-induced Cell Death
  Journal of Virology. Sep, 2002  |   Pubmed ID: 12163600
• Human Papillomavirus E2 Down-regulates the Human Telomerase Reverse Transcriptase Promoter
  The Journal of Biological Chemistry. Aug, 2002  |   Pubmed ID: 12019268
• SWI/SNF Complex Interacts with Tumor Suppressor P53 and is Necessary for the Activation of P53-mediated Transcription
  The Journal of Biological Chemistry. Jun, 2002  |   Pubmed ID: 11950834
• Functional Interaction Between P/CAF and Human Papillomavirus E2 Protein
  The Journal of Biological Chemistry. Feb, 2002  |   Pubmed ID: 11744716
• Human Papillomavirus Type 16 E7 Binds to E2F1 and Activates E2F1-driven Transcription in a Retinoblastoma Protein-independent Manner
  The Journal of Biological Chemistry. Jan, 2002  |   Pubmed ID: 11713253
• Viral Interferon Regulatory Factor 1 of Kaposi's Sarcoma-associated Herpesvirus Binds to P53 and Represses P53-dependent Transcription and Apoptosis
  Journal of Virology. Jul, 2001  |   Pubmed ID: 11390621
• The K-bZIP Protein from Kaposi's Sarcoma-associated Herpesvirus Interacts with P53 and Represses Its Transcriptional Activity
  Journal of Virology. Dec, 2000  |   Pubmed ID: 11090200