Ji-Hoon Cho Center for Proteomics and Metabolomics St. Jude Children’s Research Hospital Biography Publications Institution JoVE Articles Ji-Hoon Cho has not added a biography. If you are Ji-Hoon Cho and would like to personalize this page please email our Author Liaison for assistance. Publications JUMPt: Comprehensive Protein Turnover Modeling of In Vivo Pulse SILAC Data by Ordinary Differential Equations Analytical Chemistry. 10, 2021 | Pubmed ID: 34587451 Integrated Analysis of Ultra-deep Proteomes in Cortex, Cerebrospinal Fluid and Serum Reveals a Mitochondrial Signature in Alzheimer's Disease Molecular Neurodegeneration. 07, 2020 | Pubmed ID: 32711556 JUMPm: A Tool for Large-Scale Identification of Metabolites in Untargeted Metabolomics Metabolites. May, 2020 | Pubmed ID: 32408578 27-Plex Tandem Mass Tag Mass Spectrometry for Profiling Brain Proteome in Alzheimer's Disease Analytical Chemistry. 05, 2020 | Pubmed ID: 32343560 Core Transcriptional Regulatory Circuits in Prion Diseases Molecular Brain. 01, 2020 | Pubmed ID: 31959236 Deep Multilayer Brain Proteomics Identifies Molecular Networks in Alzheimer's Disease Progression Neuron. 03, 2020 | Pubmed ID: 31926610 Deep Multiomics Profiling of Brain Tumors Identifies Signaling Networks Downstream of Cancer Driver Genes Nature Communications. 08, 2019 | Pubmed ID: 31420543 Corrigendum to "Metabolic Switching in Pluripotent Stem Cells Reorganizes Energy Metabolism and Subcellular Organelles" [379 (2019) 55-64] Experimental Cell Research. Aug, 2019 | Pubmed ID: 31079852 Deep Undepleted Human Serum Proteome Profiling Toward Biomarker Discovery for Alzheimer's Disease Clinical Proteomics. 2019 | Pubmed ID: 31019427 Metabolic Switching in Pluripotent Stem Cells Reorganizes Energy Metabolism and Subcellular Organelles Experimental Cell Research. 06, 2019 | Pubmed ID: 30922922 Identification of Therapeutic Targets in Rhabdomyosarcoma Through Integrated Genomic, Epigenomic, and Proteomic Analyses Cancer Cell. 09, 2018 | Pubmed ID: 30146332 Isotope Labeling-Assisted Evaluation of Hydrophilic and Hydrophobic Liquid Chromatograph-Mass Spectrometry for Metabolomics Profiling Analytical Chemistry. 07, 2018 | Pubmed ID: 29883117 Target-Decoy-Based False Discovery Rate Estimation for Large-Scale Metabolite Identification Journal of Proteome Research. 07, 2018 | Pubmed ID: 29790753 Integrative Proteomics and Phosphoproteomics Profiling Reveals Dynamic Signaling Networks and Bioenergetics Pathways Underlying T Cell Activation Immunity. Mar, 2017 | Pubmed ID: 28285833 Extensive Peptide Fractionation and Y1 Ion-Based Interference Detection Method for Enabling Accurate Quantification by Isobaric Labeling and Mass Spectrometry Analytical Chemistry. Mar, 2017 | Pubmed ID: 28194965 JUMPg: An Integrative Proteogenomics Pipeline Identifying Unannotated Proteins in Human Brain and Cancer Cells Journal of Proteome Research. Jul, 2016 | Pubmed ID: 27225868 Sequential Elution Interactome Analysis of the Mind Bomb 1 Ubiquitin Ligase Reveals a Novel Role in Dendritic Spine Outgrowth Molecular & Cellular Proteomics : MCP. Jul, 2015 | Pubmed ID: 25931508 JUMPn: A Streamlined Application for Protein Co-Expression Clustering and Network Analysis in Proteomics David Vanderwall1, Poudel Suresh1,2, Yingxue Fu2, Ji-Hoon Cho2, Timothy I. Shaw2,3, Ashutosh Mishra2, Anthony A. High2, Junmin Peng1,2, Yuxin Li1,2 1Departments of Structural Biology and Developmental Neurobiology, St. Jude Children’s Research Hospital, 2Center for Proteomics and Metabolomics, St. Jude Children’s Research Hospital, 3Department of Computational Biology, St. Jude Children’s Research Hospital JoVE 62796 Biochemistry High-throughput and Deep-proteome Profiling by 16-plex Tandem Mass Tag Labeling Coupled with Two-dimensional Chromatography and Mass Spectrometry Zhen Wang*1, Kanisha Kavdia*2, Kaushik Kumar Dey1, Vishwajeeth Reddy Pagala2, Kiran Kodali2, Danting Liu1, Dong Geun Lee1, Huan Sun1, Surendhar Reddy Chepyala1, Ji-Hoon Cho2, Mingming Niu1, Anthony A. High2, Junmin Peng1,2 1Departments of Structural Biology and Developmental Neurobiology, St. Jude Children's Research Hospital, 2Center for Proteomics and Metabolomics, St. Jude Children's Research Hospital JoVE 61684 Biology Deep Proteome Profiling by Isobaric Labeling, Extensive Liquid Chromatography, Mass Spectrometry, and Software-assisted Quantification Anthony A. High1, Haiyan Tan1, Vishwajeeth R. Pagala1, Mingming Niu2,3, Ji-Hoon Cho1, Xusheng Wang1, Bing Bai2, Junmin Peng1,2 1St. Jude Proteomics Facility, St. Jude Children's Research Hospital, 2Departments of Structural Biology and Developmental Neurobiology, St. Jude Children's Research Hospital, 3Heilongjiang University of Chinese Medicine JoVE 56474 Biochemistry
JUMPn: A Streamlined Application for Protein Co-Expression Clustering and Network Analysis in Proteomics David Vanderwall1, Poudel Suresh1,2, Yingxue Fu2, Ji-Hoon Cho2, Timothy I. Shaw2,3, Ashutosh Mishra2, Anthony A. High2, Junmin Peng1,2, Yuxin Li1,2 1Departments of Structural Biology and Developmental Neurobiology, St. Jude Children’s Research Hospital, 2Center for Proteomics and Metabolomics, St. Jude Children’s Research Hospital, 3Department of Computational Biology, St. Jude Children’s Research Hospital JoVE 62796 Biochemistry
High-throughput and Deep-proteome Profiling by 16-plex Tandem Mass Tag Labeling Coupled with Two-dimensional Chromatography and Mass Spectrometry Zhen Wang*1, Kanisha Kavdia*2, Kaushik Kumar Dey1, Vishwajeeth Reddy Pagala2, Kiran Kodali2, Danting Liu1, Dong Geun Lee1, Huan Sun1, Surendhar Reddy Chepyala1, Ji-Hoon Cho2, Mingming Niu1, Anthony A. High2, Junmin Peng1,2 1Departments of Structural Biology and Developmental Neurobiology, St. Jude Children's Research Hospital, 2Center for Proteomics and Metabolomics, St. Jude Children's Research Hospital JoVE 61684 Biology
Deep Proteome Profiling by Isobaric Labeling, Extensive Liquid Chromatography, Mass Spectrometry, and Software-assisted Quantification Anthony A. High1, Haiyan Tan1, Vishwajeeth R. Pagala1, Mingming Niu2,3, Ji-Hoon Cho1, Xusheng Wang1, Bing Bai2, Junmin Peng1,2 1St. Jude Proteomics Facility, St. Jude Children's Research Hospital, 2Departments of Structural Biology and Developmental Neurobiology, St. Jude Children's Research Hospital, 3Heilongjiang University of Chinese Medicine JoVE 56474 Biochemistry
