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Biology
自动定量分析细胞计数程序使用ImageJ插件
自动定量分析细胞计数程序使用ImageJ插件
JoVE Journal
Biology
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JoVE Journal Biology
Automated Quantification and Analysis of Cell Counting Procedures Using ImageJ Plugins

自动定量分析细胞计数程序使用ImageJ插件

Full Text
49,330 Views
11:01 min
November 17, 2016

DOI: 10.3791/54719-v

Jacob O'Brien1, Heyam Hayder1, Chun Peng1

1Department of Biology,York University

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Please note that some of the translations on this page are AI generated. Click here for the English version.

Overview

This paper presents new open-source ImageJ plugins, Cell Concentration Calculator and migration assay Counter, for quantifying hemocytometer and migration/invasion micrographs. It also details image acquisition and calibration protocols, along with the input requirements for the plugins.

Key Study Components

Area of Science

  • Neuroscience
  • Cell Biology
  • Image Analysis

Background

  • Cell counting is essential for various biological assays.
  • Accurate quantification aids in understanding cell behavior.
  • Digital analysis tools can enhance counting efficiency.
  • Open-source tools promote accessibility in research.

Purpose of Study

  • To provide a method for quick and accurate cell counts.
  • To facilitate quantification in in vitro motility assays.
  • To describe the use of ImageJ plugins for cell analysis.

Methods Used

  • Utilization of ImageJ plugins for cell counting.
  • Image acquisition using a microscope with phase contrast filters.
  • Calibration protocols for accurate measurements.
  • Setting default image capture settings in microscope software.

Main Results

  • Demonstrated effectiveness of the plugins in cell quantification.
  • Provided detailed protocols for image acquisition.
  • Highlighted the advantages of digital analysis tools.
  • Showed how to meet input requirements for the plugins.

Conclusions

  • The new plugins significantly improve cell counting accuracy.
  • They offer a user-friendly approach for researchers.
  • Digital tools can streamline experimental workflows.

Frequently Asked Questions

What are the main advantages of using the new plugins?
The plugins provide fast and accurate cell counts with multiple analysis tools.
How do I set up the microscope for image acquisition?
Set the illumination to maximum and use the 4x objective with phase contrast filters.
Are the plugins suitable for all types of cell assays?
Yes, they can be used for various in vitro assays, including migration and invasion assays.
Can I access the plugins for free?
Yes, the plugins are open-source and available for free.
What is the importance of calibration in this protocol?
Calibration ensures accurate measurements and reliable results in cell counting.
Is training required to use the plugins effectively?
Basic familiarity with ImageJ is helpful, but the plugins are designed to be user-friendly.

本文通过两个新的开源 ImageJ 插件 Cell Concentration Calculator 和 Migration assay Counter 描述了血细胞计数器和迁移/侵袭显微照片的定量。 此外,它还描述了图像采集和校准协议,并详细讨论了插件的输入要求。

该方案的总体目标是使用数字分析工具快速对悬浮液中或侵袭测定膜中迁移的细胞进行准确计数。该方案可以帮助研究人员量化常用技术和体外细胞运动测定所需的细胞数量。这种方法的主要优点是它提供快速准确的细胞计数,同时包括多个过滤器和分析工具。

首先,将显微镜照明度设置为最大。切换到 4 倍物镜并确保使用相差滤光片。然后,在显微镜软件中,将图像捕获设置设置为默认值。

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