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Journal / Genetics / Mapping Alzheimer's Disease Variants to Their…
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Genetics

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JoVE Journal Genetics
Mapping Alzheimer's Disease Variants to Their Target Genes Using Computational Analysis of Chromatin Configuration
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Mapping Alzheimer's Disease Variants to Their Target Genes Using Computational Analysis of Chromatin Configuration

Article DOI: 10.3791/60428-v • 04:41 min • January 9th, 2020
January 9th, 2020 •
1,2, 3, *3,4, *1,2
1Department of Genetics, University of North Carolina, 2Neuroscience Center, University of North Carolina, 3Thurston Arthritis Research Center, University of North Carolina, 4Department of Cell Biology and Physiology, University of North Carolina
* These authors contributed equally

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Summary
Automatic Translation

We present a protocol to identify functional implications of non-coding variants identified by genome-wide association studies (GWAS) using three-dimensional chromatin interactions.

Tags

Alzheimer's Disease Variants Computational Analysis Chromatin Configuration GWAS Risk Variants Target Genes Chromatin Interaction Profiles Disease Mechanisms Therapeutic Approaches Diagnose Treat Alzheimer's Disease 3D Chromatin Contact Frequencies Base Pairs R Programming X Pair System G Ranges Object Single Nucleotide Polymorphisms (SNPs) Positional Mapping Promoter Regions Exonic Regions
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