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The ability to track ion channel conformational rearrangements in response to a known electrical stimulus in a living cell is a source of valuable information for molecular physiology1. Voltage-gated ion channels are membrane proteins that sense changes in transmembrane voltage, and their function is also affected by voltage changes2. The development of voltage clamp techniques in the last century allowed physiologists to study, in real-time, ionic currents carried by voltage-gated ion channels in response to membrane depolarization3. The use of voltage clamp technology has been crucial in understanding the electrical properties of excitable cells such as neurons and muscle. In the 1970s, voltage clamp refinement allowed for the detection of gating currents (or charge movement) in voltage-gated calcium (CaV) and sodium (NaV) channels4,5. Gating currents are non-linear capacitive currents that arise from the movement of voltage sensors in response to changes in the electric field across the cell membrane6. Gating currents are considered an electrical manifestation of molecular rearrangements that precede or accompany ion channel opening7. While these current measurements provide valuable information regarding the channel's function, both ionic currents and gating currents are indirect readouts of inter- and intra-molecular conformational rearrangements of voltage-gated channels7.
Functional site-directed fluorometry (FSDF; also referred to as voltage clamp fluorometry, VCF) was developed in the early 1990s8 and, for the first time, provided the ability to directly view local conformational changes and the function of a channel protein in real time. Using a combination of channel mutagenesis, electrophysiology, and heterologous expression systems, it is possible to fluorescently tag and track the moving parts of specific channels or receptors in response to the activating stimulus9,10. This approach has been extensively used to study the voltage-sensing mechanisms in voltage-gated ion channels8,10,11,12,13,14,15,16,17,18,19. For authoritative reviews, see10,20,21,22,23.
The CaV and NaV channels, critical for the initiation and propagation of electrical signals, are composed of a main α1 subunit, which possesses a central pore and four non-identical voltage sensing domains2. In addition to their distinct primary structure, CaV and NaV channels are expressed as multisubunit complexes with auxiliary subunits24. Voltage-dependent potassium channels (KV) consist of four subunits that look like a single domain of NaV or CaV25. The pore-forming and voltage-sensing α1 subunit of CaV and NaV channels is formed by a single polypeptide coding for four individual domains of six unique transmembrane segments (S1-S6; Figure 1A)24,26. The region comprised by S1 to S4 transmembrane segments form the voltage sensing domain (VSD) and S5 and S6 transmembrane segments form the pore domain26. In each VSD, the S4 α-helix contains positively charged arginine or lysine (Figure 1A,B) that move in response to membrane depolarization7. Several decades of research and the results from highly diverse experimental approaches support the premise that S4 segments move outward, generating gating currents, in response to membrane depolarization6.
FSDF measures the fluorescence changes of a thiol-reactive dye conjugated to a specific cysteine residue (i.e., the S4 α-helix) on an ion channel or other protein, engineered via site-directed mutagenesis, as the channel functions in response to membrane depolarization or other stimuli10. In fact, FSDF was originally developed to investigate whether the S4 segment in KV channels, proposed to be the main voltage sensor of the channel, moves when the gating charges move in response to changes in membrane potential8,10. In case of voltage-gated ion channels, FSDF can resolve independent conformational rearrangements of the four VSDs (tracking one VSD at any given time), concurrently with channel function measurements. Indeed, using this approach, it has been shown that individual VSDs appear to be differentially involved in specific aspects of channel activation and inactivation12,27,28,29,30. Identifying the contribution of each VSD to the channels' function is of high relevance and can be used to further elucidate channel operation and potentially identify new targets for drug development.
The use of FSDF in heterologous expression systems has been extremely helpful in furthering our understanding of channel function from a reductionist perspective10,23. Like many reductionist approaches, it presents advantages but also has limitations. For instance, one major limitation is the partial reconstitution of the channel nano environment in the heterologous system. Often, ion channels interact with numerous accessory subunits and numerous other proteins that modify their function31. In principle, different channels and their accessory subunits can be expressed in heterologous systems with the use of multiple protein coding constructs or polycistronic plasmids, but their native environment cannot be fully reconstituted30,32.
Our group recently published a variant of FSDF in native dissociated skeletal muscle fibers for the study of early steps of excitation-contraction coupling (ECC)33,34, the process by which muscle fiber electrical depolarization is linked to the activation of muscle contraction35,36. For the first time, this approach allowed the motion tracking of individual S4 voltage-sensors from the voltage-gated L-type Ca2+ channel (CaV1.1, also known as DHPR) in the native environment of an adult differentiated muscle fiber37. This was accomplished by considering multiple characteristics of this cell type, including the electrical activity of the cell allowing fast stimulation-induced self-propagated depolarization, the ability to express cDNA plasmid through in vivo electroporation, the natural high expression and compartmental organization of the channels within the cell, and its compatibility with high-speed imaging and electrophysiological recording devices. Previously, we used a high-speed line scanning confocal microscope as a detecting device37. Now, a variation of the technique is presented using a photodiode for signal acquisition. This photodiode-based detection system could facilitate the implementation of this technique in other laboratories.
Here, a step-by-step protocol to utilize FSDF in native cells for the study of individual voltage-sensor movement from CaV1.1 is described. While the CaV1.1 channel has been used as an example throughout this manuscript, this technique could be applied to extracellularly accessible domains of other ion channels, receptors, or surface proteins.