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JoVE Journal Neuroscience
Real-Time fMRI Brain Mapping in Animals
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Real-Time fMRI Brain Mapping in Animals

Article DOI: 10.3791/61463-v • 04:05 min • September 24th, 2020
September 24th, 2020 •
1,2, 1,2, 1,3, 4, 1,2, 1,2, 1,2, 1,3
1Max Planck Institute for Biological Cybernetics, 2Graduate Training Centre of Neuroscience, 3MGH/MIT/HMS Athinoula A. Martinos Center for Biomedical Imaging, Department of Radiology, Harvard Medical School, Massachusetts General Hospital, 4Bruker BioSpin

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Summary
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Animal brain functional mapping can benefit from the real-time functional magnetic resonance imaging (fMRI) experimental set-up. Using the latest software implemented in the animal MRI system, we established a real-time monitoring platform for small animal fMRI.

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Real-Time FMRI Brain Mapping Animals Dynamic FMRI Response Console Software Troubleshooting Feasibility Biofeedback Simulation Paradigm Brain Functional Studies Anatomical Images Coronal View T2 Weighted Rare Sequence Realtime FMRI Software Terminal Window Realtime AFNI Plugin Path AFNI Software Diamond Command PVC MD Command Background Macro Script EPI Acquisition Parameters Exec PVC MD Command 3D ECHO Planar Imaging Raw Data AFNI Files TOD-3D Command EPI Geometrical Information T2 Star Weighted 3D EPI Sequence Bold FMRI Imaging Overlay EPI Images Anatomical Rare Images
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