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固有动力学可视化工具,一种交互式应用程序,用于评估和可视化基因调控网络推理管道的输出
JoVE Journal
Biology
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JoVE Journal
Biology
Inherent Dynamics Visualizer, an Interactive Application for Evaluating and Visualizing Outputs from a Gene Regulatory Network Inference Pipeline
Please note that all translations are automatically generated.
Click here for the English version.
固有动力学可视化工具,一种交互式应用程序,用于评估和可视化基因调控网络推理管道的输出
DOI:
10.3791/63084-v
•
10:44 min
•
December 07, 2021
•
Robert C. Moseley
,
Sophia Campione
,
Bree Cummins
,
Francis Motta
,
Steven B. Haase
1
Department of Biology
,
Duke University
,
2
Department of Mathematical Sciences
,
Montana State University
,
3
Department of Mathematical Sciences
,
Florida Atlantic University
Chapters
00:04
Introduction
00:46
Node Finding
03:40
Edge Finding
05:32
Network Finding
08:14
Results: Investigating the Core Oscillator Gene Regulatory Network of the Yeast Cell-Cycle
10:06
Conclusion
Summary
Automatic Translation
English (Original)
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Automatic Translation
固有动力学可视化工具是一个交互式可视化包,可连接到基因调控网络推理工具,以增强、简化功能网络模型的生成。可视化工具可用于为推理工具的参数化做出更明智的决策,从而提高对结果模型的信心。
Tags
Gene Regulatory Network
Inference Pipeline
Inherent Dynamics Visualizer
Interactive Application
Visualization
Parameter Exploration
Time Series Data
Annotation File
Output File
Number Of Processes
DLxJTK
Cutoff
Gene List
Article
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