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Journal / Genetics / Demonstration av sekvensjusteringen för att…
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JoVE Journal Genetics
Demonstration av sekvensjusteringen för att förutsäga över arters känslighetsverktyg för snabb bedömning av proteinbevarande
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Demonstration av sekvensjusteringen för att förutsäga över arters känslighetsverktyg för snabb bedömning av proteinbevarande

Article DOI: 10.3791/63970-v • 16:02 min • February 10th, 2023
February 10th, 2023 •
1, 2, 2, 3, 4, 5, 5, 5, 6
1Office of Research and Development, Center for Computational Toxicology and Exposure, Scientific Computing and Data Curation Division, U.S. Environmental Protection Agency, 2Oak Ridge Institute for Science and Education, 3Swenson College of Science and Engineering, Department of Biology, University of Minnesota Duluth, 4University of Wisconsin-Madison Aquatic Sciences Center, 5General Dynamics Information Technology, Research Triangle Park, 6Office of Research and Development, Center for Computational Toxicology and Exposure, Great Lakes Toxicology and Ecology Division, U.S. Environmental Protection Agency

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Här presenterar vi ett protokoll för att använda den senaste versionen av verktyget US Environmental Protection Agency Sequence Alignment to Predict Across Species Susceptibility (SeqAPASS). Detta protokoll visar tillämpningen av onlineverktyget för att snabbt analysera proteinbevarande och ge anpassningsbara och lättolkade förutsägelser om kemisk mottaglighet mellan arter.

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