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Method Article

Spatial Separation of Molecular Conformers and Clusters

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DOI:

10.3791/51137

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January 9th, 2014

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In This Article

Summary

We present a technique that allows the spatial separation of different conformers or clusters present in a molecular beam. An electrostatic deflector is used to separate species by their mass-to-dipole moment ratio, leading to the production of gas-phase ensembles of a single conformer or cluster stoichiometry.

Abstract

Gas-phase molecular physics and physical chemistry experiments commonly use supersonic expansions through pulsed valves for the production of cold molecular beams. However, these beams often contain multiple conformers and clusters, even at low rotational temperatures. We present an experimental methodology that allows the spatial separation of these constituent parts of a molecular beam expansion. Using an electric deflector the beam is separated by its mass-to-dipole moment ratio, analogous to a bender or an electric sector mass spectrometer spatially dispersing charged molecules on the basis of their mass-to-charge ratio. This deflector exploits the Stark effect in an inhomogeneous electric field and allows the separation of individual species of polar neutral molecules and clusters. It furthermore allows the selection of the coldest part of a molecular beam, as low-energy rotational quantum states generally experience the largest deflection. Different structural isomers (conformers) of a species can be separated due to the different arrangement of functional groups, which leads to distinct dipole moments. These are exploited by the electrostatic deflector for the production of a conformationally pure sample from a molecular beam. Similarly, specific cluster stoichiometries can be selected, as the mass and dipole moment of a given cluster depends on the degree of solvation around the parent molecule. This allows experiments on specific cluster sizes and structures, enabling the systematic study of solvation of neutral molecules.

Introduction

Modern gas-phase molecular physics and physical chemistry experiments often use supersonic expansions of target molecules to produce rotationally cold molecular samples within a molecular beam. However, even at low rotational temperatures of 1 K, which can routinely be achieved using supersonic expansions, large molecules can still remain in multiple conformations within the beam1. Similarly the production of molecular clusters in a beam source does not result in a single species, but rather in the formation of a "cluster soup", containing many different cluster stoichiometries, as well as remaining pure parent molecules. This makes the study of these syste....

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Protocol

1. Description of the Experimental Setup

A schematic of the gas-phase molecular beam setup and deflector is shown in Figure 221. It consists of

  1. A pulsed Even-Lavie valve29 containing the molecular sample. Other pulsed molecular beam valves can be used equally well as long as a cold molecular beam (O(1 K)) is formed. The following parameters are specific for the employed Even-Lavie valve. In the experiments presented here the valve is operated at 20 Hz repetition rate with high backing pressures (helium at ~50 bar) and expanded into a vacuum chamber evacuated to <10-6 mba....

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Results

The electrostatic deflection technique has been successfully applied to the separation of structural isomers16 and neutral clusters21, as well as the production of rotational quantum state selected molecular samples31. We demonstrate this with representative results for the separation of cis and trans conformers of 3-fluorophenol, and size selected indole(H2O)n clusters.

3-Fluorophenol conformers were separated in a molec.......

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Discussion

Throughout this manuscript, familiarity with ultra-high vacuum components, pulsed molecular beam valves and laser sources is assumed and the associated safety procedures should always be adhered to. Special care needs to be taken when handling the high voltage electrodes for the deflector. Their surfaces need to be polished to a high standard and must be absolutely clean to avoid arcing inside the vacuum chamber. Before first use the electrodes should be conditioned under vacuum. The voltage applied is slowly increased and the current throug.......

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Disclosures

The authors have nothing to disclose.

Acknowledgements

This work has been supported by the excellence cluster "The Hamburg Center for Ultrafast Imaging – Structure, Dynamics and Control of Matter at the Atomic Scale" of the Deutsche Forschungsgemeinschaft and by the Helmholtz Virtual Institute "Dynamic Pathways in Multidimensional Landscapes".

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Materials

List of materials used in this article
NameCompanyCatalog NumberComments
Vacuum systemvarious, e.g. Pfeiffer Vacuum, Varian, Edwards, Leybold
Dye laser systemvarious, e.g. Coherent, Spectra Physics, Syrah, LIOP-TEC, Radiant Dyes…
Pulsed valveEven-Lavie
High voltage power supplyeg. FUGHCP 14-20000
DeflectorCustom made
Time-of-flight spectrometerJordan TOFC-677
TOF power supplyJordan TOFD-603
Focusing lensThorlabsLA4745
Translation stagee.g. Vision Lasertechnik8MT167-25
Digitizere.g. AgilentAcquiris DC440
Digital delay generatorStanford SystemsSRS DG645
Molecular beam skimmerBeam Dynamics Inc.http://www.beamdynamicsinc.com/

References

  1. Rizzo, T. R., Park, Y. D., Peteanu, L., Levy, D. H. Electronic spectrum of the amino acid tryptophan cooled in a supersonic molecular beam. J. Chem. Phys. 83, 4819-4820 (1985).
  2. Itatani, J., et al. Tomographic imaging of molecular orbitals. Nature. 432, 867....

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