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JoVE Journal
Biochemistry
A Semi-High-Throughput Adaptation of the NADH-Coupled ATPase Assay for Screening Small Molecule I...
A Semi-High-Throughput Adaptation of the NADH-Coupled ATPase Assay for Screening Small Molecule I...
JoVE Journal
Biochemistry
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JoVE Journal Biochemistry
A Semi-High-Throughput Adaptation of the NADH-Coupled ATPase Assay for Screening Small Molecule Inhibitors

A Semi-High-Throughput Adaptation of the NADH-Coupled ATPase Assay for Screening Small Molecule Inhibitors

Full Text
10,528 Views
10:28 min
August 17, 2019

DOI: 10.3791/60017-v

Laszlo Radnai1,2, Rebecca F. Stremel1,2, James R. Sellers3, Gavin Rumbaugh2, Courtney A. Miller1,2

1Department of Molecular Medicine,The Scripps Research Institute, 2Department of Neuroscience,The Scripps Research Institute, 3Laboratory of Molecular Physiology, NHLBI,National Institutes of Health

Overview

This article presents a protocol for a nicotinamide adenine dinucleotide (NADH)-coupled ATPase assay optimized for semi-high-throughput screening of small molecule myosin inhibitors. The assay is designed to be run in a 384-well microplate format, making it suitable for various ADP-producing enzymes.

Key Study Components

Area of Science

  • Neuroscience
  • Biochemistry
  • Pharmacology

Background

  • The assay is applicable to developing ATPase inhibitors.
  • It serves as a probe for basic research and potential clinical compounds.
  • The method avoids common artifacts and does not involve hazardous materials.
  • Specific inhibitors for non-muscle myosin II are being developed for treating methamphetamine use disorder.

Purpose of Study

  • To provide a reliable screening method for ATPase inhibitors.
  • To facilitate research into non-muscle myosin II inhibitors.
  • To optimize the assay for semi-high-throughput applications.

Methods Used

  • NADH-coupled ATPase assay.
  • 384-well microplate format.
  • 20 µL total reaction volumes per well.
  • Visual demonstrations to clarify technical details.

Main Results

  • Successful adaptation of the assay for screening small molecule inhibitors.
  • Demonstrated applicability to various ADP-producing enzymes.
  • Potential for developing specific inhibitors for clinical use.
  • Minimized handling of hazardous materials during the process.

Conclusions

  • The optimized assay is effective for semi-high-throughput screening.
  • It can be applied to a wide range of ATP-producing enzymes.
  • Further research may lead to new therapeutic options for methamphetamine use disorder.

Frequently Asked Questions

What is the main application of this assay?
The assay is primarily used for screening ATPase inhibitors, particularly for non-muscle myosin II.
How does this method avoid common artifacts?
The method has been optimized to minimize artifacts and does not require hazardous materials.
What is the significance of using a 384-well format?
The 384-well format allows for semi-high-throughput screening, increasing efficiency in testing multiple compounds.
Can this assay be used for other enzymes?
Yes, it can be applied to any enzymes that produce ATP.
What are the potential clinical implications of this research?
The research aims to develop specific inhibitors that could be used in treating methamphetamine use disorder.
Is visual demonstration included in the protocol?
Yes, visual demonstrations are provided to clarify important technical details.

A nicotinamide adenine dinucleotide (NADH)-coupled ATPase assay has been adapted to semihigh throughput screening of small molecule myosin inhibitors. This kinetic assay is run in a 384-well microplate format with total reaction volumes of only 20 µL per well. The platform should be applicable to virtually any ADP producing enzyme.

This protocol is applicable to a wide range of screening projects aimed at developing ATPase inhibitors, either as probes for basic research or for potential clinical compounds. This method has been optimized for semi-high-throughput screening applications. It's also been designed to avoid several common artifacts and it doesn't require the handling of hazardous materials.

In our laboratory we have been using this assay to develop new and specific non-muscle myosin II inhibitors for the treatment of methamphetamine use disorder. In theory, this method can easily be applied to any enzymes producing ATP. Visual demonstration helps to clarify all the important technical details.

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