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Chapters
- 00:05Title
- 01:49Installation of the Software Package
- 04:02Analysis of a Crystal Structure
- 05:22Construction of a DNA Structure from Rigid-body Parameters
- 06:38Analysis of Multi-model Structure Files
- 08:15Superposition of Multi-model Structures onto a Common Reference Frame
- 09:29Construction of a Protein-decorated DNA Molecule
- 11:54Results: Nucleic Acid Structure Analysis and Reconstruction with 3DNA
- 15:52Conclusion
Den 3DNA softwarepakke er en alsidig og populær bioinformatik værktøj med kapaciteter til at analysere, konstruere og visualisere tredimensionale nukleinsyrestrukturer. Denne artikel præsenterer detaljerede protokoller for en delmængde af nye og populære funktioner i 3DNA, der gælder for både individuelle strukturer og ensembler af relaterede strukturer.
Tags
3DNA Software PackageBioinformatics ToolNucleic Acid StructuresAnalyze StructuresConstruct StructuresVisualize StructuresProtocolsDownload SoftwareInstall SoftwareBase Pair AssignmentRigid-body ParametersAtomic Model ReconstructionEnsembles Of StructuresNMR MeasurementsMD SimulationsW3DNA Web ServerUser-friendly InterfaceBuild ModelsDNA MoleculesBound Proteins
