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Chapters
- 00:05Introduction
- 01:13Schneiders Line 2 Plus (S2R+) Drosophila Cell Fixation
- 02:02Lysis
- 03:18Enzymatic Digestion, DNA End Biotinylation, and Ligation
- 04:37Crosslink Reversal and DNA Purification
- 05:33Hi-C Template Quality Evaluation
- 06:26Biotin Removal/End Repair and Size Selection
- 07:49Biotin Pulldown/A-Tailing/Adapter Ligation
- 09:33Results: Representative In-Nucleus Hi-C Analysis
- 11:17Conclusion
The genome is organized in the nuclear space into different structures that can be revealed through chromosome conformation capture technologies. The in-nucleus Hi-C method provides a genome-wide collection of chromatin interactions in Drosophila cell lines, which generates contact maps that can be explored at megabase resolution at restriction fragment level.
